Transcript: lnc-TRIM28-14:3

Basic information

LNCipedia transcript ID: lnc-TRIM28-14:3 
LNCipedia gene ID: lnc-TRIM28-14
Location (hg38): chr19:58573503-58581646
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 569 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT068463
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -160.8695 non-coding 
CPAT coding probability 4.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM28-14:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM28-1:6
4.0 MZF1-AS1:6
4.1 MZF1-AS1:6
5.0 MZF1-AS1:6
5.1 lnc-ZNF587B-58:3
5.2 lnc-TRIM28-14:3