Transcript: lnc-TRIM28-14:4

Basic information

LNCipedia transcript ID: lnc-TRIM28-14:4 
LNCipedia gene ID: lnc-TRIM28-14
Location (hg38): chr19:58573661-58574901
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1241 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267858.1|ENCT00000209375.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -81.0022 non-coding 
CPAT coding probability 2.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM28-14:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MZF1-AS1:15
5.0 MZF1-AS1:15
5.1 lnc-ZNF587B-58:4
5.2 lnc-TRIM28-14:4