Transcript: lnc-TRIM29-46:1

Basic information

LNCipedia transcript ID: lnc-TRIM29-46:1 
LNCipedia gene ID: lnc-TRIM29-46
RefSeq ID: NR_133008
Location (hg38): chr11:120811345-120819115
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 417 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_133008.1
Alternative gene names: LOC105369532


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 217.5945 coding 
CPAT coding probability 2.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TRIM29-46:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SLC37A4-46:1
5.1 lnc-SLC37A4-46:1
5.2 lnc-TRIM29-46:1