Transcript: lnc-TRIM29-8:2

Basic information

LNCipedia transcript ID: lnc-TRIM29-8:2 
LNCipedia gene ID: lnc-TRIM29-8
RefSeq ID: NR_133004
Location (hg38): chr11:120940554-120958039
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 512 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_133004.1
Alternative gene names: LOC101929208


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -153.9582 non-coding 
CPAT coding probability 5.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM29-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SLC37A4-49:2
5.1 lnc-SLC37A4-49:2
5.2 lnc-TRIM29-8:2