Transcript: lnc-TRIM29-8:3

Basic information

LNCipedia transcript ID: lnc-TRIM29-8:3 
LNCipedia gene ID: lnc-TRIM29-8
Location (hg38): chr11:120940524-120951037
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 457 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT024735
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.9582 non-coding 
CPAT coding probability 1.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM29-8:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM29-7:1
4.0 lnc-TRIM29-7:1
4.1 lnc-TRIM29-7:1
5.0 lnc-TRIM29-7:1
5.1 lnc-SLC37A4-49:3
5.2 lnc-TRIM29-8:3