Transcript: lnc-TRIM39-2:1

Basic information

LNCipedia transcript ID: lnc-TRIM39-2:1 
LNCipedia gene ID: lnc-TRIM39-2
Location (hg38): chr6:30259562-30266951
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4622 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT108609; NR_027822
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.257 non-coding 
CPAT coding probability 97.23% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TRIM39-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM39-2:1
4.0 lnc-TRIM39-2:1
4.1 lnc-TRIM39-2:1
5.0 lnc-TRIM39-2:1
5.1 lnc-OR2I1P-38:1
5.2 lnc-TRIM39-2:1