Transcript: lnc-TRIM43-3:2

Basic information

LNCipedia transcript ID: lnc-TRIM43-3:2 
LNCipedia gene ID: lnc-TRIM43-3
Location (hg38): chr2:95607073-95616592
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 276 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT072502
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.1884 non-coding 
CPAT coding probability 33.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM43-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM43-3:2
4.0 lnc-TRIM43-3:2
4.1 lnc-TRIM43-3:2
5.0 lnc-TRIM43-3:2
5.1 lnc-SLC9A4-127:2
5.2 lnc-TRIM43-3:2