Transcript: lnc-TRIM43B-1:1

Basic information

LNCipedia transcript ID: lnc-TRIM43B-1:1 
LNCipedia gene ID: lnc-TRIM43B-1
Location (hg38): chr2:95525109-95526739
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1631 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272913.1|ENST00000609975.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 67.6272 coding 
CPAT coding probability 34.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TRIM43B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANKRD36C-10:3
5.0 lnc-ANKRD36C-10:3
5.1 lnc-ZNF514-26:1
5.2 lnc-TRIM43B-1:1