Transcript: lnc-TRIM45-1:3

Basic information

LNCipedia transcript ID: lnc-TRIM45-1:3 
LNCipedia gene ID: lnc-TRIM45-1
Location (hg38): chr1:117025482-117059490
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1809 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT005463
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.6964 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM45-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM45-1:3
4.0 lnc-TRIM45-1:3
4.1 lnc-TRIM45-1:3
5.0 lnc-TRIM45-1:3
5.1 lnc-CD58-13:15
5.2 lnc-TRIM45-1:3