Transcript: lnc-TRIM45-1:7

Basic information

LNCipedia transcript ID: lnc-TRIM45-1:7 
LNCipedia gene ID: lnc-TRIM45-1
Location (hg38): chr1:117059813-117060040
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 228 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236137.1|FTMT20200006121.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM45-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TRIM45-1:7
5.0 lnc-TRIM45-1:7
5.1 lnc-CD58-13:7
5.2 lnc-TRIM45-1:7