Transcript: lnc-TRIO-8:1

Basic information

LNCipedia transcript ID: lnc-TRIO-8:1 
LNCipedia gene ID: lnc-TRIO-8
Location (hg38): chr5:12794731-12795522
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 792 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT100519
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.3609 non-coding 
CPAT coding probability 90.68% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TRIO-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIO-8:1
4.0 lnc-TRIO-8:1
4.1 lnc-TRIO-8:1
5.0 lnc-TRIO-8:1
5.1 lnc-CARD6-234:1
5.2 lnc-TRIO-8:1