Transcript: lnc-TRIP10-1:1

Basic information

LNCipedia transcript ID: lnc-TRIP10-1:1 
LNCipedia gene ID: lnc-TRIP10-1
Location (hg38): chr19:6656374-6662821
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1367 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026873; NONHSAT060779
Alternative gene names: XLOC_012931; linc-TRIP10-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.8263 non-coding 
CPAT coding probability 13.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIP10-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRIP10-1:1
3.1 lnc-TRIP10-1:1
4.0 lnc-TRIP10-1:1
4.1 lnc-TRIP10-1:1
5.0 lnc-TRIP10-1:1
5.1 lnc-TRIP10-1:1
5.2 lnc-TRIP10-1:1