Transcript: lnc-TRMT11-1:6

Basic information

LNCipedia transcript ID: lnc-TRMT11-1:6 
LNCipedia gene ID: lnc-TRMT11-1
Location (hg38): chr6:126074083-126076184
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1015 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_28371_transcript_7
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.942 non-coding 
CPAT coding probability 1.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRMT11-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRMT11-1:6
4.0 lnc-TRMT11-1:6
4.1 lnc-TRMT11-1:6
5.0 lnc-TRMT11-1:6
5.1 lnc-NCOA7-4:5
5.2 lnc-TRMT11-1:6