Transcript: lnc-TRMT9B-1:1

Basic information

LNCipedia transcript ID: lnc-TRMT9B-1:1 
LNCipedia gene ID: lnc-TRMT9B-1
Location (hg38): chr8:12865474-12871945
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 591 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014625; NONHSAT125185
Alternative gene names: XLOC_006722; linc-C8orf79-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.4368 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRMT9B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA1456.1-1:1
3.1 lnc-KIAA1456.1-1:1
4.0 lnc-KIAA1456.1-1:1
4.1 lnc-KIAA1456.1-1:1
5.0 lnc-KIAA1456.1-1:1
5.1 lnc-DEFB106A-85:1
5.2 lnc-TRMT9B-1:1