Transcript: lnc-TRPM7-1:1

Basic information

LNCipedia transcript ID: lnc-TRPM7-1:1 
LNCipedia gene ID: lnc-TRPM7-1
Location (hg38): chr15:50324561-50733298
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 504 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000506446
Alternative gene names: ENSG00000250395


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8716 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRPM7-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRPM7-1:1
3.1 lnc-TRPM7-1:1
4.0 lnc-TRPM7-1:1
4.1 lnc-TRPM7-1:1
5.0 lnc-TRPM7-1:1
5.1 lnc-DNAAF4-100:1
5.2 lnc-TRPM7-1:1