Transcript: lnc-TRUB2-8:1

Basic information

LNCipedia transcript ID: lnc-TRUB2-8:1 
LNCipedia gene ID: lnc-TRUB2-8
Location (hg38): chr9:128392012-128393510
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1499 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608502.1
Alternative gene names: ENSG00000207955.2; MIR219-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.6878 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRUB2-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRUB2-8:1
4.0 lnc-TRUB2-8:1
4.1 lnc-TRUB2-8:1
5.0 lnc-TRUB2-8:1
5.1 lnc-SPOUT1-13:1
5.2 lnc-TRUB2-8:1