Transcript: lnc-TRUB2-8:2

Basic information

LNCipedia transcript ID: lnc-TRUB2-8:2 
LNCipedia gene ID: lnc-TRUB2-8
Ensembl Gene ID: ENSG00000207955
Ensembl Transcript ID: ENST00000608502
Location (hg38): chr9:128392007-128393510
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1504 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608502.2
Alternative gene names: ENSG00000207955.3; MIR219A2; ENSG00000207955.4; ENSG00000207955.5; AL359091.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.6878 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRUB2-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TRUB2-8:2
4.1 lnc-TRUB2-8:2
5.0 lnc-TRUB2-8:2
5.1 lnc-SPOUT1-13:2
5.2 lnc-TRUB2-8:2