Transcript: lnc-TSEN34-10:1

Basic information

LNCipedia transcript ID: lnc-TSEN34-10:1 
LNCipedia gene ID: lnc-TSEN34-10
Ensembl Gene ID: ENSG00000269524
Ensembl Transcript ID: ENST00000601161
Location (hg38): chr19:54224523-54224881
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 359 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000601161.1
Alternative gene names: ENSG00000269524.1; CTB-83J4.1; AC245052.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.0737 non-coding 
CPAT coding probability 12.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSEN34-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CACNG6-10:1
5.1 lnc-CACNG6-10:1
5.2 lnc-TSEN34-10:1