Transcript: lnc-TSHR-9:3

Basic information

LNCipedia transcript ID: lnc-TSHR-9:3 
LNCipedia gene ID: lnc-TSHR-9
Location (hg38): chr14:81221072-81223701
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2380 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000019710.1|MICT00000108081.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -68.4645 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSHR-9:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TSHR-2:14
5.0 lnc-TSHR-2:14
5.1 lnc-FLRT2-2:39
5.2 lnc-TSHR-9:3