Transcript: lnc-TSHR-9:8

Basic information

LNCipedia transcript ID: lnc-TSHR-9:8 
LNCipedia gene ID: lnc-TSHR-9
Ensembl Gene ID: ENSG00000273783
Ensembl Transcript ID: ENST00000618431
Location (hg38): chr14:81221218-81222460
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1130 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000618431.1
Alternative gene names: ENSG00000273783.1; CTD-2506P8.6; AL136040.2; AL136040.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -167.0114 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSHR-9:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TSHR-2:5
4.1 lnc-TSHR-2:5
5.0 lnc-TSHR-2:5
5.1 lnc-FLRT2-2:44
5.2 lnc-TSHR-9:8