Transcript: lnc-TSHZ1-4:2

Basic information

LNCipedia transcript ID: lnc-TSHZ1-4:2 
LNCipedia gene ID: lnc-TSHZ1-4
Location (hg38): chr18:75403164-75459347
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 343 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1624_chr18:73115118-73171302_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.4685 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSHZ1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSHZ1-5:1
4.0 lnc-TSHZ1-5:1
4.1 lnc-TSHZ1-4:2
5.0 lnc-TSHZ1-4:2
5.1 lnc-KCNG2-41:1
5.2 lnc-TSHZ1-4:2