Transcript: lnc-TSN-4:3

Basic information

LNCipedia transcript ID: lnc-TSN-4:3 
LNCipedia gene ID: lnc-TSN-4
Location (hg38): chr2:121530409-121532705
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 695 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265451.1|ENST00000577914.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -144.9291 non-coding 
CPAT coding probability 21.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSN-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TSN-4:3
5.0 lnc-TSN-4:3
5.1 lnc-TMEM37-31:1
5.2 lnc-TSN-4:3