Transcript: lnc-TSPAN3-4:2

Basic information

LNCipedia transcript ID: lnc-TSPAN3-4:2 
LNCipedia gene ID: lnc-TSPAN3-4
RefSeq ID: NR_026813
Location (hg38): chr15:77223893-77225404
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1512 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026813.1
Alternative gene names: LINC00597


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -155.9443 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSPAN3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LINGO1-15:2
5.1 lnc-LINGO1-15:2
5.2 lnc-TSPAN3-4:2