Transcript: lnc-TSPOAP1-1:1

Basic information

LNCipedia transcript ID: lnc-TSPOAP1-1:1 
LNCipedia gene ID: lnc-TSPOAP1-1
Location (hg38): chr17:58329668-58332520
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1751 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265206.2|FTMT26500012094.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 64.4433 coding 
CPAT coding probability 8.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TSPOAP1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BZRAP1-1:2
5.0 lnc-BZRAP1-1:2
5.1 lnc-PTRH2-25:1
5.2 lnc-TSPOAP1-1:1