Transcript: lnc-TSPYL6-6:1

Basic information

LNCipedia transcript ID: lnc-TSPYL6-6:1 
LNCipedia gene ID: lnc-TSPYL6-6
Location (hg38): chr2:54569452-54574454
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 469 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048500.1|FTMT20500019321.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -975.4811 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSPYL6-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TSPYL6-6:1
5.0 lnc-TSPYL6-6:1
5.1 lnc-PPP4R3B-27:1
5.2 lnc-TSPYL6-6:1