Transcript: lnc-TSR3-2:3

Basic information

LNCipedia transcript ID: lnc-TSR3-2:3 
LNCipedia gene ID: lnc-TSR3-2
Location (hg38): chr16:1305553-1308868
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3292 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028429.1|ENCT00000162470.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.5793 non-coding 
CPAT coding probability 7.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSR3-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C16orf42-2:3
5.0 lnc-C16orf42-2:3
5.1 lnc-PKMYT1-93:3
5.2 lnc-TSR3-2:3