Transcript: lnc-TSSK2-8:1

Basic information

LNCipedia transcript ID: lnc-TSSK2-8:1 
LNCipedia gene ID: lnc-TSSK2-8
Location (hg38): chr22:19179019-19179998
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 980 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000057119.1|FTMT28800000188.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.5024 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSSK2-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TSSK2-8:1
5.0 lnc-TSSK2-8:1
5.1 lnc-SERPIND1-35:1
5.2 lnc-TSSK2-8:1