Transcript: lnc-TSTD3-1:2

Basic information

LNCipedia transcript ID: lnc-TSTD3-1:2 
LNCipedia gene ID: lnc-TSTD3-1
Location (hg38): chr6:99532206-99538120
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1101 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3221_chr6:99980081-99985914_kidney
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.3812 non-coding 
CPAT coding probability 2.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSTD3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRDM13-1:6
4.0 lnc-PRDM13-1:6
4.1 lnc-PRDM13-1:6
5.0 lnc-PRDM13-1:6
5.1 lnc-SMPD2-92:2
5.2 lnc-TSTD3-1:2