Transcript: lnc-TSTD3-2:3

Basic information

LNCipedia transcript ID: lnc-TSTD3-2:3 
LNCipedia gene ID: lnc-TSTD3-2
Location (hg38): chr6:99424919-99431373
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1641 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228506.1|ENST00000418945.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.2282 non-coding 
CPAT coding probability 9.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSTD3-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PRDM13-2:4
5.0 lnc-PRDM13-2:4
5.1 lnc-SMPD2-91:3
5.2 lnc-TSTD3-2:3