Transcript: lnc-TTC21A-76:1

Basic information

LNCipedia transcript ID: lnc-TTC21A-76:1 
LNCipedia gene ID: lnc-TTC21A-76
Ensembl Gene ID: ENSG00000284669
Ensembl Transcript ID: ENST00000641308
Location (hg38): chr3:39148281-39172952
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4975 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641308.1
Alternative gene names: ENSG00000284669.1; AC092053.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.6999 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC21A-76:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-KLHL40-76:1
5.1 lnc-KLHL40-76:1
5.2 lnc-TTC21A-76:1