Transcript: lnc-TTC21A-76:3

Basic information

LNCipedia transcript ID: lnc-TTC21A-76:3 
LNCipedia gene ID: lnc-TTC21A-76
Ensembl Gene ID: ENSG00000283849
Ensembl Transcript ID: ENST00000640557
Location (hg38): chr3:39152906-39154723
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1818 bp
Exons: 1
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000640557.1
Alternative gene names: ENSG00000283849.1; AC092053.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -81.2923 non-coding 
CPAT coding probability 34.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC21A-76:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-KLHL40-76:3
5.1 lnc-KLHL40-76:3
5.2 lnc-TTC21A-76:3