Transcript: lnc-TTC33-5:1

Basic information

LNCipedia transcript ID: lnc-TTC33-5:1 
LNCipedia gene ID: lnc-TTC33-5
Location (hg38): chr5:40641613-40679716
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1255 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000079614.1|HBMT00001161058.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.1456 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC33-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TTC33-5:1
5.0 lnc-TTC33-5:1
5.1 lnc-SELENOP-38:2
5.2 lnc-TTC33-5:1