Transcript: lnc-TTC38-7:2

Basic information

LNCipedia transcript ID: lnc-TTC38-7:2 
LNCipedia gene ID: lnc-TTC38-7
Ensembl Gene ID: ENSG00000280384
Ensembl Transcript ID: ENST00000624818
Location (hg38): chr22:46163303-46165347
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2045 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624818.1
Alternative gene names: ENSG00000280384.1; RP4-695O20.1; FP325332.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.7895 non-coding 
CPAT coding probability 2.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC38-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP4-695O20__B.10.1-7:1
4.1 lnc-RP4-695O20__B.10.1-7:1
5.0 lnc-RP4-695O20__B.10.1-7:1
5.1 lnc-TTC38-7:1
5.2 lnc-TTC38-7:2