Transcript: lnc-TTC7A-2:2

Basic information

LNCipedia transcript ID: lnc-TTC7A-2:2 
LNCipedia gene ID: lnc-TTC7A-2
Location (hg38): chr2:47080410-47094601
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2474 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1829_chr2:47307548-47321740_76bGuttman_hLF
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.501 non-coding 
CPAT coding probability 3.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC7A-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTC7A-2:2
4.0 lnc-TTC7A-2:2
4.1 lnc-TTC7A-2:2
5.0 lnc-TTC7A-2:2
5.1 lnc-TTC7A-2:2
5.2 lnc-TTC7A-2:2