Transcript: lnc-TTC8-4:2

Basic information

LNCipedia transcript ID: lnc-TTC8-4:2 
LNCipedia gene ID: lnc-TTC8-4
Location (hg38): chr14:89350287-89353793
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 599 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258752.1|ENST00000555407.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -152.5243 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC8-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-33N16.1.1-3:3
5.0 lnc-RP11-33N16.1.1-3:3
5.1 lnc-SPATA7-13:2
5.2 lnc-TTC8-4:2