Transcript: lnc-TTLL7-7:1

Basic information

LNCipedia transcript ID: lnc-TTLL7-7:1 
LNCipedia gene ID: lnc-TTLL7-7
Ensembl Gene ID: ENSG00000236676
Ensembl Transcript ID: ENST00000430748
Location (hg38): chr1:81585941-81625713
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 641 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430748.1; RP5-837I24.4-001; OTTHUMT00000027179.1; NONHSAT004132
Alternative gene names: ENSG00000236676.1; RP5-837I24.4; OTTHUMG00000009842.1; AC117944.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.5897 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTLL7-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTLL7-7:1
4.0 lnc-TTLL7-7:1
4.1 lnc-TTLL7-7:1
5.0 lnc-TTLL7-7:1
5.1 lnc-FUBP1-43:1
5.2 lnc-TTLL7-7:1