Transcript: lnc-TTR-1:2

Basic information

LNCipedia transcript ID: lnc-TTR-1:2 
LNCipedia gene ID: lnc-TTR-1
Location (hg38): chr18:31684725-31687859
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3135 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT058829
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.9689 non-coding 
CPAT coding probability 3.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTR-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTR-1:2
4.0 lnc-TTR-1:2
4.1 lnc-TTR-1:2
5.0 lnc-TTR-1:2
5.1 lnc-RIOK3-78:1
5.2 lnc-TTR-1:2