Transcript: lnc-TTR-1:4

Basic information

LNCipedia transcript ID: lnc-TTR-1:4 
LNCipedia gene ID: lnc-TTR-1
Location (hg38): chr18:31684830-31689295
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4466 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259985.1|ENCT00000191813.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -46.9689 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTR-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TTR-1:4
5.0 lnc-TTR-1:4
5.1 lnc-RIOK3-78:2
5.2 lnc-TTR-1:4