Transcript: lnc-TUBA1A-1:4

Basic information

LNCipedia transcript ID: lnc-TUBA1A-1:4 
LNCipedia gene ID: lnc-TUBA1A-1
Location (hg38): chr12:49248890-49264783
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 15894 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258101.1|ENCT00000101603.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.8317 non-coding 
CPAT coding probability 2.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBA1A-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TUBA1A-1:4
5.0 lnc-TUBA1A-1:4
5.1 lnc-RACGAP1-20:2
5.2 lnc-TUBA1A-1:4