Transcript: lnc-TUBA1A-1:7

Basic information

LNCipedia transcript ID: lnc-TUBA1A-1:7 
LNCipedia gene ID: lnc-TUBA1A-1
Location (hg38): chr12:49232960-49233738
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 779 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258101.1|FTMT24600002200.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -138.5446 non-coding 
CPAT coding probability 3.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBA1A-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TUBA1A-1:7
5.0 lnc-TUBA1A-1:7
5.1 lnc-RACGAP1-20:7
5.2 lnc-TUBA1A-1:7