Transcript: lnc-TUBB1-1:2

Basic information

LNCipedia transcript ID: lnc-TUBB1-1:2 
LNCipedia gene ID: lnc-TUBB1-1
Location (hg38): chr20:59123404-59147026
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 898 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000610729.1
Alternative gene names: ENSG00000274961.1; RP3-492J12.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.1876 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBB1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF831-1:3
4.1 lnc-ZNF831-1:3
5.0 lnc-ZNF831-1:3
5.1 lnc-GNAS-8:1
5.2 lnc-TUBB1-1:2