Transcript: lnc-TUBB8P12-2:3

Basic information

LNCipedia transcript ID: lnc-TUBB8P12-2:3 
LNCipedia gene ID: lnc-TUBB8P12-2
Ensembl Gene ID: ENSG00000263305
Ensembl Transcript ID: ENST00000572608
Location (hg38): chr18:14195-14958
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 567 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000572608.1; AP005530.2-002; OTTHUMT00000439670.1; NONHSAT056819
Alternative gene names: ENSG00000263305.1; AP005530.2; OTTHUMG00000177911.1; AP005530.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.2868 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBB8P12-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-683L23.1.1-2:3
4.0 lnc-RP11-683L23.1.1-2:3
4.1 lnc-RP11-683L23.1.1-2:3
5.0 lnc-RP11-683L23.1.1-2:3
5.1 lnc-SMAD2-399:3
5.2 lnc-TUBB8P12-2:3