Transcript: lnc-TUBGCP3-4:6

Basic information

LNCipedia transcript ID: lnc-TUBGCP3-4:6 
LNCipedia gene ID: lnc-TUBGCP3-4
RefSeq ID: NR_120422
Location (hg38): chr13:112256725-112273000
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1938 bp
Exons: 9
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120422.1
Alternative gene names: LOC101928730


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.6585 non-coding 
CPAT coding probability 30.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBGCP3-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DCUN1D2-17:4
5.1 lnc-DCUN1D2-17:4
5.2 lnc-TUBGCP3-4:6