Transcript: lnc-TWIST2-14:2

Basic information

LNCipedia transcript ID: lnc-TWIST2-14:2 
LNCipedia gene ID: lnc-TWIST2-14
RefSeq ID: NR_135576
Location (hg38): chr2:239401720-239402364
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 540 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135576.1
Alternative gene names: LOC101928111


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -140.7343 non-coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TWIST2-14:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TRAF3IP1-14:2
5.1 lnc-TRAF3IP1-14:2
5.2 lnc-TWIST2-14:2