Transcript: lnc-TXLNB-2:2

Basic information

LNCipedia transcript ID: lnc-TXLNB-2:2 
LNCipedia gene ID: lnc-TXLNB-2
Location (hg38): chr6:139292159-139296599
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 361 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012298; NONHSAT115247
Alternative gene names: XLOC_005854; linc-TXLNB-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -218.0737 non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TXLNB-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TXLNB-2:2
3.1 lnc-TXLNB-2:2
4.0 lnc-TXLNB-2:2
4.1 lnc-TXLNB-2:2
5.0 lnc-TXLNB-2:2
5.1 lnc-OLIG3-44:2
5.2 lnc-TXLNB-2:2