Transcript: lnc-UAP1L1-1:1

Basic information

LNCipedia transcript ID: lnc-UAP1L1-1:1 
LNCipedia gene ID: lnc-UAP1L1-1
Location (hg38): chr9:137063535-137064581
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 748 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000456356.1; RP11-229P13.23-001; OTTHUMT00000055265.1; NONHSAT135667
Alternative gene names: ENSG00000231864.1; RP11-229P13.23; OTTHUMG00000020975.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 35.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UAP1L1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UAP1L1-1:1
4.0 lnc-UAP1L1-1:1
4.1 lnc-UAP1L1-1:1
5.0 lnc-UAP1L1-1:1
5.1 lnc-GPSM1-42:1
5.2 lnc-UAP1L1-1:1