Transcript: lnc-UBASH3A-1:6

Basic information

LNCipedia transcript ID: lnc-UBASH3A-1:6 
LNCipedia gene ID: lnc-UBASH3A-1
Location (hg38): chr21:42496572-42497443
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 416 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000239930.2|ENST00000416179.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -114.4772 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBASH3A-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC37A1-1:4
5.0 lnc-SLC37A1-1:4
5.1 lnc-PDE9A-9:4
5.2 lnc-UBASH3A-1:6