Transcript: lnc-UBASH3A-1:8

Basic information

LNCipedia transcript ID: lnc-UBASH3A-1:8 
LNCipedia gene ID: lnc-UBASH3A-1
Location (hg38): chr21:42496572-42498246
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1675 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000239930.2|ENCT00000271783.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.8005 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBASH3A-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC37A1-1:6
5.0 lnc-SLC37A1-1:6
5.1 lnc-PDE9A-9:6
5.2 lnc-UBASH3A-1:8