Transcript: lnc-UBASH3A-8:4

Basic information

LNCipedia transcript ID: lnc-UBASH3A-8:4 
LNCipedia gene ID: lnc-UBASH3A-8
Location (hg38): chr21:42461408-42470737
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4305 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000056163.1|MICT00000226904.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.6413 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBASH3A-8:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UBASH3A-8:4
5.0 lnc-UBASH3A-8:4
5.1 lnc-PDE9A-11:4
5.2 lnc-UBASH3A-8:4