Transcript: lnc-UBASH3B-6:1

Basic information

LNCipedia transcript ID: lnc-UBASH3B-6:1 
LNCipedia gene ID: lnc-UBASH3B-6
Location (hg38): chr11:122187021-122187851
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 541 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT024804; FPKM1_group_5516_transcript_9
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -234.9888 non-coding 
CPAT coding probability 2.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBASH3B-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBASH3B-6:1
4.0 lnc-UBASH3B-6:1
4.1 lnc-UBASH3B-6:1
5.0 lnc-UBASH3B-6:1
5.1 lnc-HINFP-35:1
5.2 lnc-UBASH3B-6:1